November 16, 2011

Adam Urbanski's “Glimpses into FSC Biology Research”

Adam Urbanski, TriBeta Vice President
                FSC biology students are participating in many exciting research projects this semester as members of the Ecology Research or Molecular Biology Research courses.  Their projects investigate a wide variety of biological questions and seek to create new knowledge and increase information about their topics.  Below is a glimpse into some of the ongoing research in the Molecular Biology course. 
                Seniors Jordan Campbell, Han Nguyen, and Jon Scott are investigating the DNA of the elusive Siren lacertina, a large aquatic member of the salamander family that can be found in Lake Hollingsworth.  The team is working with members of the Ecology course to capture and tag specimens in the lake and acquire DNA samples from them.  Once the molecular biology team has isolated and amplified the DNA, they will use several DNA primers to sequence a portion of the genome.  This information will be used to compare and analyze differences in DNA sequence to related salamander species Pseudobranchus.
                Jessie Fleming and Alexander Stein (also seniors), are working with Raphanus sativus:  the radish.  They will be studying radish seeds that have been exposed to specific amounts of radiation and quantifying the amount of genetic damage that is suffered from different amounts of radiation exposure.  The team plans to grow the irradiated seeds for several weeks and gather enough plant material to extract DNA from each exposure level.  The DNA will be analyzed and compared using Southern Blotting and Gel Electrophoresis techniques.  Fleming and Stein hope to use their data to predict damage done to flora exposed to radiation from the Fukushima Daiichi nuclear plant in Japan.
                Finally, seniors Byron Hu, Sebastien Parisot, and Adam Urbanski are exploring the photoreactivation mechanism of DNA repair.  Photoreactivation mends UV damaged genetic material through exposure to visible light.  The team plans on isolating the genes necessary for light production in bioluminescent bacteria and transferring them into strains of Escherichia coli (bacteria) and Saccharomyces cerevisiae (yeast) so that they will also exhibit bioluminescence.  These “glow in the dark” strains will be exposed to UV radiation and placed in dark surroundings.  The team will measure the transformed strains capability to heal their DNA through photoreactivation stimulated by their own light production.  

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